Publications by Current and Former Trainees

  • Sellers ZM, Barakat MT, Abu-El-Haija M. A Practical Approach to Management of Acute Pancreatitis: Similarities and Dissimilarities of Disease in Children and Adults. J Clin Med. 2021 Jun 8;10(12):10.3390/jcm10122545. doi: 10.3390/jcm10122545. PMID: 34201374; PMCID: PMC8228675.
  • Ofosu A, Higgins J, Frye JS, Kumari R, Barakat MT. Strongyloides Superinfection After Liver Transplantion. Dig Dis Sci. 2021 Jul;66(7):2178-2182. doi: 10.1007/s10620-020-06696-3. Epub 2020 Nov 21. PMID: 33219458.
  • Huang RJ, Barakat MT, Park W, Banerjee S. Quality metrics in the performance of EUS: a population-based observational cohort of the United States. Gastrointest Endosc. 2021 Jul;94(1):68-74.e3. doi: 10.1016/j.gie.2020.12.055. Epub 2021 Jan 18. PMID: 33476611.
  • Barakat MT, Adler DG. Endoscopic ampullectomy: Can expert input shape endoscopic practice? Gastrointest Endosc. 2021 Oct;94(4):774-775. doi: 10.1016/j.gie.2021.05.030. Epub 2021 Aug 19. PMID: 34419246.
  • Li J, Le MH, Barakat MT, Cheung RC, Nguyen MH. The Changing Epidemiology of Liver Disease Among US Children and Adolescents From 1999 to 2016. Am J Gastroenterol. 2021 Oct 1;116(10):2068-2078. doi: 10.14309/ajg.0000000000001386. PMID: 34328446.
  • Lee LD, Delclos G, Berkheiser ML, Barakat MT, Jensen PA. Evaluation of multiple fixed in-room air cleaners with ultraviolet germicidal irradiation, in high-occupancy areas of selected commercial indoor environments. J Occup Environ Hyg. 2022 Jan;19(1):67-77. doi: 10.1080/15459624.2021.1991581. Epub 2021 Dec 16. PMID: 34647857.
  • Ramai D, Facciorusso A, DeLuca M, Barakat M, Adler DG. Adverse events associated with AXIOS stents: Insights from the manufacturer and user facility device experience database. Endosc Ultrasound. 2022;11(3):231-236. doi: 10.4103/EUS-D-21-00096. PMID: 35083979; PMCID: PMC9258023.
  • Ferreira-Silva J, Medas R, Girotra M, Barakat M, Tabibian JH, Rodrigues-Pinto E. Futuristic Developments and Applications in Endoluminal Stenting. Gastroenterol Res Pract. 2022 Jan 11;2022:6774925. doi: 10.1155/2022/6774925. PMID: 35069729; PMCID: PMC8767390.
  • Barakat MT, Girotra M, Banerjee S. Initial application of deep learning to borescope detection of endoscope working channel damage and residue. Endosc Int Open. 2022 Jan 14;10(1):E112-E118. doi: 10.1055/a-1591-0258. PMID: 35047341; PMCID: PMC8759945.
  • Keihanian T, Barakat MT, Tejaswi S, Mishra R, Carlson CJ, Brandabur JJ, Girotra M. Role of Endoscopic Retrograde Cholangiopancreatography in the Diagnosis and Management of Cholestatic Liver Diseases. Clin Liver Dis. 2022 Feb;26(1):51-67. doi: 10.1016/j.cld.2021.08.006. Epub 2021 Oct 25. PMID: 34802663.
  • Stassen PMC, de Jonge PJF, Bruno MJ, Koch AD, Trindade AJ, Benias PC, Sejpal DV, Siddiqui UD, Chapman CG, Villa E, Tharian B, Inamdar S, Hwang JH, Barakat MT, Andalib I, Gaidhane M, Sarkar A, Shahid H, Tyberg A, Binmoeller K, Watson RR, Nett A, Schlag C, Abdelhafez M, Friedrich-Rust M, Schlachterman A, Chiang AL, Loren D, Kowalski T, et al. Safety and efficacy of a novel resection system for direct endoscopic necrosectomy of walled-off pancreas necrosis: a prospective, international, multicenter trial. Gastrointest Endosc. 2022 Mar;95(3):471-479. doi: 10.1016/j.gie.2021.09.025. Epub 2021 Sep 22. PMID: 34562471.
  • Sharma S, Barakat M, Urs A, Campbell D, Rao P, Schluckebier D, Gugig R, Thomson M. Applicability, efficacy, and safety of over-the-scope clips in children. Gastrointest Endosc. 2022 Mar;95(3):489-499. doi: 10.1016/j.gie.2021.10.011. Epub 2021 Oct 16. PMID: 34662583.
  • Barakat MT. Top tips for electrohydraulic lithotripsy (with video). Gastrointest Endosc. 2022 Mar;95(3):565-567. doi: 10.1016/j.gie.2021.11.005. Epub 2021 Nov 12. PMID: 34774855.
  • Thiruvengadam SS, Fung BM, Barakat MT, Tabibian JH. Endoscopic Mucosal Resection: Best Practices for Gastrointestinal Endoscopists. Gastroenterol Hepatol (N Y). 2022 Mar;18(3):133-144. PMID: 35506001; PMCID: PMC9053487.
  • Barakat MT, Ghosh S, Banerjee S. Cost utility analysis of strategies for minimizing risk of duodenoscope-related infections. Gastrointest Endosc. 2022 May;95(5):929-938.e2. doi: 10.1016/j.gie.2022.01.002. Epub 2022 Jan 10. PMID: 35026281.
  • Barakat MT, Cagil Y, Gugig R. Landscape of Pediatric Endoscopic Ultrasound in a United States Tertiary Care Medical Center. J Pediatr Gastroenterol Nutr. 2022 May 1;74(5):657-661. doi: 10.1097/MPG.0000000000003403. PMID: 35149652.
  • Ofosu A, Ramai D, Mozell D, Facciorusso A, Juakiem W, Adler DG, Barakat MT. Analysis of reported adverse events related to single-use duodenoscopes and duodenoscopes with detachable endcaps. Gastrointest Endosc. 2022 Jul;96(1):67-72. doi: 10.1016/j.gie.2022.02.013. Epub 2022 Feb 17. PMID: 35183542.
  • Barakat MT, Berquist WE, Gugig R. Cholangioscopy in Children and Adolescents: Utilization, Outcomes, and Safety. J Pediatr Gastroenterol Nutr. 2022 Aug 1;75(2):196-201. doi: 10.1097/MPG.0000000000003499. Epub 2022 Jun 1. PMID: 35653429.
  • Li J, Ha A, Rui F, Zou B, Yang H, Xue Q, Hu X, Xu Y, Henry L, Barakat M, Stave CD, Shi J, Wu C, Cheung R, Nguyen MH. Meta-analysis: global prevalence, trend and forecasting of non-alcoholic fatty liver disease in children and adolescents, 2000-2021. Aliment Pharmacol Ther. 2022 Aug;56(3):396-406. doi: 10.1111/apt.17096. Epub 2022 Jun 23. PMID: 35736008.
  • Mencin AA, Sethi A, Barakat MT, Lerner DG. Peroral Endoscopic Myotomy (POEM) in Children: A State of the Art Review. J Pediatr Gastroenterol Nutr. 2022 Sep 1;75(3):231-236. doi: 10.1097/MPG.0000000000003503. Epub 2022 Aug 9. PMID: 35653433.
  • Barakat MT, Khalid A, Yu M, Ding Y, Murayi JA, Jayaraman T, Poropatich R, Akshintala V, Juakiem W, Wen L, Papachristou GI, Husain SZ. A review of the rationale for the testing of the calcineurin inhibitor tacrolimus for post-ERCP pancreatitis prevention. Pancreatology. 2022 Sep;22(6):678-682. doi: 10.1016/j.pan.2022.07.003. Epub 2022 Jul 13. PMID: 35872075.
  • Barakat MT, Abu-El-Haija M, Husain SZ. Clinical insights into drug-associated pancreatic injury. Curr Opin Gastroenterol. 2022 Sep 1;38(5):482-486. doi: 10.1097/MOG.0000000000000865. PMID: 35916322.
  • Ramai D, DeLuca M, Facciorusso A, Ofosu A, Girotra M, Tabibian JH, Rodrigues-Pinto E, Adler DG, Barakat MT. Analysis of Reported Adverse Events With Colonic Stents: An FDA MAUDE Database Study. J Clin Gastroenterol. 2022 Oct 1;56(9):784-786. doi: 10.1097/MCG.0000000000001632. Epub 2021 Dec 15. PMID: 34907923.
  • Akshintala VS, Husain SZ, Brenner TA, Singh A, Singh VK, Khashab MA, Sperna Weiland CJ, van Geenen EJM, Bush N, Barakat M, Srivastava A, Kochhar R, Talukdar R, Rodge G, Wu CCH, Lakhtakia S, Sinha SK, Goenka MK, Reddy DN. Rectal INdomethacin, oral TacROlimus, or their combination for the prevention of post-ERCP pancreatitis (INTRO Trial): Protocol for a randomized, controlled, double-blinded trial. Pancreatology. 2022 Nov;22(7):887-893. doi: 10.1016/j.pan.2022.07.008. Epub 2022 Jul 19. PMID: 35872074.
  • Medas R, Ferreira-Silva J, Girotra M, Barakat M, Tabibian JH, Rodrigues-Pinto E. Best Practices in Esophageal, Gastroduodenal, and Colonic Stenting. GE Port J Gastroenterol. 2022 Nov 7;30(Suppl 1):19-34. doi: 10.1159/000527202. PMID: 37818397; PMCID: PMC10561327.
  • Barakat MT, Pei F, Gugig R. Pediatric Endoscopy Blocks: Enhanced Efficiency and Endoscopist Satisfaction. J Pediatr Gastroenterol Nutr. 2023 Jan 1;76(1):72-76. doi: 10.1097/MPG.0000000000003624. Epub 2022 Sep 20. PMID: 36123768.
  • Martin M, Lee J, Gugig R, Ofosu A, Charville GW, Barakat MT. The Majority of Patients Who Undergo ERCP When Large Duct Obstruction Is Evident on Liver Biopsy Have Biliary Findings Amenable to Endoscopic Intervention. J Clin Med. 2023 Jan 6;12(2):10.3390/jcm12020482. doi: 10.3390/jcm12020482. PMID: 36675410; PMCID: PMC9861601.
  • Ramai D, Pannu V, Facciorusso A, Dhindsa B, Heaton J, Ofosu A, Chandan S, Maida M, Lattanzi B, Rodriguez E, Bhagat VH, Samanta J, Barakat MT. Advances in Endoscopic Ultrasound (EUS)-Guided Liver Biopsy. Diagnostics (Basel). 2023 Feb 19;13(4):10.3390/diagnostics13040784. doi: 10.3390/diagnostics13040784. PMID: 36832272; PMCID: PMC9955464.
  • Barakat MT, Husain SZ, Gugig R. Safety and efficacy of minor papillotomy in children and adolescents with pancreas divisum. Pancreatology. 2023 Mar;23(2):171-175. doi: 10.1016/j.pan.2022.12.009. Epub 2022 Dec 21. PMID: 36641286.
  • Tsai CY, Saito T, Sarangdhar M, Abu-El-Haija M, Wen L, Lee B, Yu M, Lipata DA, Manohar M, Barakat MT, Contrepois K, Tran TH, Theoret Y, Bo N, Ding Y, Stevenson K, Ladas EJ, Silverman LB, Quadro L, Anthony TG, Jegga AG, Husain SZ. A systems approach points to a therapeutic role for retinoids in asparaginase-associated pancreatitis. Sci Transl Med. 2023 Mar 15;15(687):eabn2110. doi: 10.1126/scitranslmed.abn2110. Epub ahead of print. PMID: 36921036; PMCID: PMC10205044.
  • Grover AS, Gugig R, Barakat MT. Endoscopy and Pediatric Pancreatitis. Gastrointest Endosc Clin N Am. 2023 Apr;33(2):363-378. doi: 10.1016/j.giec.2022.11.002. PMID: 36948751.
  • Ni J, Khalid A, Lin YC, Barakat MT, Wang J, Tsai CY, Azar PRS, Ding Y, Murayi JA, Jayaraman T, Poropatich R, Bottino R, Wen L, Papachristou GI, Swaminathan G, Yu M, Husain SZ. Preclinical safety evaluation of calcineurin inhibitors delivered through an intraductal route to prevent post-ERCP pancreatitis demonstrates endocrine and systemic safety. Pancreatology. 2023 Jun;23(4):333-340. doi: 10.1016/j.pan.2023.03.009. Epub 2023 Mar 30. PMID: 37031049.
  • Barakat MT. In the era of duodenoscopes with single-use endcaps, what is the role for single-use duodenoscopes? Gastrointest Endosc. 2023 Jul;98(1):119-121. doi: 10.1016/j.gie.2023.03.025. Epub 2023 Mar 31. PMID: 37004813.
  • Medas R, Ferreira-Silva J, Girotra M, Barakat M, Tabibian JH, Rodrigues-Pinto E. Best Practices in Pancreatico-biliary Stenting and EUS-guided Drainage. J Clin Gastroenterol. 2023 Jul 1;57(6):553-568. doi: 10.1097/MCG.0000000000001760. PMID: 36040964.
  • Barakat MT, Angelotti T, Ghosh S, Banerjee S. Prospective randomized comparison of endoscopist-facilitated endotracheal intubation and standard intubation for ERCP. Gastrointest Endosc. 2023 Sep;98(3):441-447. doi: 10.1016/j.gie.2023.02.032. Epub 2023 Mar 5. PMID: 36878302.
  • Ramai D, Heaton J, Ofosu A, Gkolfakis P, Chandan S, Tringali A, Barakat MT, Hassan C, Repici A, Facciorusso A. Influence of Frailty in Patients Undergoing Endoscopic Retrograde Cholangiopancreatography for Biliary Stone Disease: A Nationwide Study. Dig Dis Sci. 2023 Sep;68(9):3605-3613. doi: 10.1007/s10620-023-08013-0. Epub 2023 Jun 27. PMID: 37368202.
  • Lin YC, Ni J, Swaminathan G, Khalid A, Barakat MT, Frymoyer AR, Tsai CY, Ding Y, Murayi JA, Jayaraman T, Poropatich R, Bottino R, Wen L, Papachristou GI, Sheth SG, Yu M, Husain SZ. Rectal administration of tacrolimus protects against post-ERCP pancreatitis in mice. Pancreatology. 2023 Nov;23(7):777-783. doi: 10.1016/j.pan.2023.09.080. Epub 2023 Sep 24. PMID: 37778935.
  • Ramai D, Smit E, Kani HT, Papaefthymiou A, Warner L, Chandan S, Dhindsa B, Facciorusso A, Gkolfakis P, Ofosu A, Barakat M, Adler DG. Cannulation rates and technical performance evaluation of commericially available single-use duodenoscopes for endoscopic retrograde cholangiopancreatography: A systematic review and meta-analysis. Dig Liver Dis. 2024 Jan;56(1):123-129. doi: 10.1016/j.dld.2023.02.022. Epub 2023 Mar 30. PMID: 37003844.
  • Ramai D, Deliwala SS, Mozell D, Facciorusso A, Chandan S, Persaud A, Singh K, Anderloni A, Barakat MT. Adverse Events of Endoscopic Clip Placement: A MAUDE Database Analysis. J Clin Gastroenterol. 2024 Jan 1;58(1):76-79. doi: 10.1097/MCG.0000000000001822. PMID: 36728443.
  • Barakat MT, Banerjee S, Angelotti T. Anesthetic Considerations for Patients with Locked-In Syndrome Undergoing Endoscopic Procedures. Am J Case Rep. 2024 Feb 15;25:e942906. doi: 10.12659/AJCR.942906. PMID: 38356258; PMCID: PMC10877638.
  • Barakat MT, Liman AY, Gugig R. Pediatric ERCP: Evolving into an Outpatient Procedure. Dig Dis Sci. 2024 Feb 28:10.1007/s10620-024-08325-9. doi: 10.1007/s10620-024-08325-9. Epub ahead of print. PMID: 38418682.
  • Barakat MT, Banerjee S, Lee L, Angelotti T. Beyond duodenoscope-transmitted infections: Analysis of surface bioburden and UV-C mitigation within a tertiary care endoscopy unit. Am J Infect Control. 2024 Mar;52(3):331-336. doi: 10.1016/j.ajic.2023.09.016. Epub 2023 Sep 28. PMID: 37776900.
  • Barakat MT, Liman A, Gugig R. Initial Experience with Duodenoscopes with Single-Use End Caps in Pediatric Endoscopic Retrograde Cholangiopancreatography: Infection Prevention Comes at a Cost. Gastrointest Endosc. 2024 Mar 8:10.1016/j.gie.2024.03.009. doi: 10.1016/j.gie.2024.03.009. Epub ahead of print. PMID: 38462055.
  • Haider S, Ramai D, Shah S, Riyat ND, Spadaccini M, Chandan S, Maida M, Rehman AU, Barakat MT. Outcomes of ERCP in Patients With Cystic Fibrosis: A Nationwide Inpatient Assessment. J Clin Gastroenterol. 2024 Mar 28:10.1097/MCG.0000000000001993. doi: 10.1097/MCG.0000000000001993. Epub ahead of print. PMID: 38546483.
  • Jaber F, Alsakarneh S, Alsharaeh T, Salahat AJ, Jaber M, Abboud Y, Aldiabat M, Ahmed K, Abdallah M, Abdel-Jalil A, Bilal M, Barakat M, Adler DG. Adverse Events and Device Failures Associated with Pancreatic Stents: A Comprehensive Analysis Using the FDA's MAUDE Database. Dig Dis Sci. 2024 Apr 5:10.1007/s10620-024-08396-8. doi: 10.1007/s10620-024-08396-8. Epub ahead of print. PMID: 38580887.
  • Ramai D, Ofosu A, Siadappa P, Chandan S, Barakat MT. Advanced trainee perceptions of disposable duodenoscopes and disposable endcaps: results of a nationwide survey. Surg Endosc. 2024 May 6:10.1007/s00464-024-10855-2. doi: 10.1007/s00464-024-10855-2. Epub ahead of print. PMID: 38710887.
  • Weiskopf K, Kao KS, Gordon SR, Rosental B, Yiu YY, George BM, Markovic M, Ring NG, Tsai JM, McKenna KM, Ho PY, Cheng RZ, Chen JY, Barkal LJ, Ring AM, Weissman IL, Maute RL. Engagement of MHC class I by the inhibitory receptor LILRB1 suppresses macrophages and is a target of cancer immunotherapy. Nat Immunol. 2018 Jan;19(1):76-84. doi: 10.1038/s41590-017-0004-z. Epub 2017 Nov 27. PMID: 29180808; PMCID: PMC5832354.
  • Brewer RE, Markovic M, Kowarsky M, Zaro BW, Krishnan V, Hatakeyama J, Dorigo O, Barkal LJ, Weissman IL. CD24 signalling through macrophage Siglec-10 is a target for cancer immunotherapy. Nature. 2019 Aug;572(7769):392-396. doi: 10.1038/s41586-019-1456-0. Epub 2019 Jul 31. PMID: 31367043; PMCID: PMC6697206.
  • Haddock NL, Barkal LJ, Ram-Mohan N, Kaber G, Chiu CY, Bhatt AS, Yang S, Bollyky PL. Phage diversity in cell-free DNA identifies bacterial pathogens in human sepsis cases. Nat Microbiol. 2023 Aug;8(8):1495-1507. doi: 10.1038/s41564-023-01406-x. Epub 2023 Jun 12. PMID: 37308590; PMCID: PMC10911932.
  • Tang-Quan KR, Bartos J, Deuse T, Churchill E, Schafer H, Reichenspurner H, Mochly-Rosen D, Robbins RC, Schrepfer S. Non-volume-loaded heart provides a more relevant heterotopic transplantation model. Transpl Immunol. 2010 May;23(1-2):65-70. doi: 10.1016/j.trim.2010.04.005. Epub 2010 Apr 18. PMID: 20403439.