Publications by Current and Former Trainees

  • Yokoi A, Villar-Prados A, Oliphint PA, Zhang J, Song X, De Hoff P, Morey R, Liu J, Roszik J, Clise-Dwyer K, Burks JK, O'Halloran TJ, Laurent LC, Sood AK. Mechanisms of nuclear content loading to exosomes. Sci Adv. 2019 Nov 20;5(11):eaax8849. doi: 10.1126/sciadv.aax8849. PMID: 31799396; PMCID: PMC6867874.
  • Ma S, McGuire MH, Mangala LS, Lee S, Stur E, Hu W, Bayraktar E, Villar-Prados A, Ivan C, Wu SY, Yokoi A, Dasari SK, Jennings NB, Liu J, Lopez-Berestein G, Ram P, Sood AK. Gain-of-function p53 protein transferred via small extracellular vesicles promotes conversion of fibroblasts to a cancer-associated phenotype. Cell Rep. 2021 Feb 9;34(6):108726. doi: 10.1016/j.celrep.2021.108726. PMID: 33567287; PMCID: PMC7957825.
  • Villar-Prados A, Chang JJ, Stevens DA, Schoolnik GK, Wang SXY. Severe Posaconazole-Induced Glucocorticoid Deficiency with Concurrent Pseudohyperaldosteronism: An Unfortunate Two-for-One Special. J Fungi (Basel). 2021 Jul 30;7(8):10.3390/jof7080620. doi: 10.3390/jof7080620. PMID: 34436160; PMCID: PMC8397024.
  • Ma S, Mangala LS, Hu W, Bayaktar E, Yokoi A, Hu W, Pradeep S, Lee S, Piehowski PD, Villar-Prados A, Wu SY, McGuire MH, Lara OD, Rodriguez-Aguayo C, LaFargue CJ, Jennings NB, Rodland KD, Liu T, Kundra V, Ram PT, Ramakrishnan S, Lopez-Berestein G, Coleman RL, Sood AK. CD63-mediated cloaking of VEGF in small extracellular vesicles contributes to anti-VEGF therapy resistance. Cell Rep. 2021 Aug 17;36(7):109549. doi: 10.1016/j.celrep.2021.109549. PMID: 34407412; PMCID: PMC8422976.
  • Villar-Prados A, Abdelmonem M, Duda M, Chien M, Yunce M. A single center experience for clinical evaluation of paroxysmal cold hemoglobinuria and Donath-Landsteiner testing. Transfusion. 2023 Oct;63(10):1969-1977. doi: 10.1111/trf.17520. Epub 2023 Aug 26. PMID: 37632701.
  • Zhang H, Villar-Prados A, Bussel JB, Zehnder JL. The highs and lows of cyclic thrombocytopenia. Br J Haematol. 2024 Jan;204(1):56-67. doi: 10.1111/bjh.19239. Epub 2023 Dec 11. PMID: 38083878; PMCID: PMC10906350.
  • Weingarden AR. Author Spotlight: Alexa R. Weingarden. Dig Dis Sci. 2020 Oct;65(10):2810. doi: 10.1007/s10620-020-06131-7. PMID: 32040663.
  • Weingarden AR, Smith P, Streett S, Triadafilopoulos G. A Failure to Communicate: Disentangling the Causes of Perianal Fistulæ in Crohn's Disease and Anal Squamous Cell Cancer. Dig Dis Sci. 2020 Oct;65(10):2806-2809. doi: 10.1007/s10620-020-06130-8. PMID: 32037474.
  • Farber ON, Weingarden A, Lee C, Braxton DR, Bingham D, Scott G, Fernandez-Becker N, Goff D, Shelton A, Kin C. Not in the Same Vein: Inflammatory Bowel Disease, Malignancy, and Enterocolic Lymphocytic Phlebitis. Dig Dis Sci. 2021 Feb;66(2):413-418. doi: 10.1007/s10620-020-06425-w. PMID: 32594463.
  • Weingarden AR, Villescas V, Clarke J, Triadafilopoulos G. Occam's Razor: An Unusual Shoulder Mass in a Patient with Achalasia. Dig Dis Sci. 2021 Mar;66(3):724-727. doi: 10.1007/s10620-020-06558-y. PMID: 32833155.
  • Weingarden AR, Rubin SJS, Gubatan J. Immune checkpoint inhibitor-mediated colitis in gastrointestinal malignancies and inflammatory bowel disease. World J Gastrointest Oncol. 2021 Aug 15;13(8):772-798. doi: 10.4251/wjgo.v13.i8.772. PMID: 34457186; PMCID: PMC8371513.
  • Weingarden AR, Gubatan J, Singh S, Balabanis TC, Patel A, Sharma A, Habtezion A. Immune checkpoint inhibitor-mediated colitis is associated with cancer overall survival. World J Gastroenterol. 2022 Oct 21;28(39):5750-5763. doi: 10.3748/wjg.v28.i39.5750. PMID: 36338892; PMCID: PMC9627421.
  • Weingarden AR, Treiger O, Ulsh L, Limketkai B, Goldenberg D, Okafor P, Sonu I, Stollman N, Neshatian L. Delivery of Fecal Material to Terminal Ileum Is Associated with Long-Term Success of Fecal Microbiota Transplantation. Dig Dis Sci. 2023 May;68(5):2006-2014. doi: 10.1007/s10620-022-07761-9. Epub 2022 Nov 13. PMID: 36372864; PMCID: PMC10994768.
  • Weingarden AR, Ko CW. Non-prescription Therapeutics. Am J Gastroenterol. 2024 Jan 1;119(1S):S7-S15. doi: 10.14309/ajg.0000000000002578. PMID: 38153220.
  • Weldy CS, Syed SA, Amsallem M, Hu DQ, Ji X, Punn R, Taylor A, Navarre B, Reddy S. Circulating whole genome miRNA expression corresponds to progressive right ventricle enlargement and systolic dysfunction in adults with tetralogy of Fallot. PLoS One. 2020 Nov 11;15(11):e0241476. doi: 10.1371/journal.pone.0241476. PMID: 33175850; PMCID: PMC7657553.
  • Weldy CS, Ashley EA. Mulibrey Nanism and the Real Time Use of Genome and Biobank Engines to Inform Clinical Care in an Ultrarare Disease. Circ Genom Precis Med. 2021 Jun;14(3):e003430. doi: 10.1161/CIRCGEN.121.003430. Epub 2021 Jun 7. PMID: 34096331.
  • Weldy CS, Ashley EA. Towards precision medicine in heart failure. Nat Rev Cardiol. 2021 Nov;18(11):745-762. doi: 10.1038/s41569-021-00566-9. Epub 2021 Jun 9. PMID: 34108678.
  • Weldy CS, Murtha R, Kim JB. Dissecting the Genomics of Spontaneous Coronary Artery Dissection. Circ Genom Precis Med. 2022 Oct;15(5):e003867. doi: 10.1161/CIRCGEN.122.003867. Epub 2022 Aug 18. PMID: 35980654; PMCID: PMC9588691.
  • Kim HJ, Cheng P, Travisano S, Weldy C, Monteiro JP, Kundu R, Nguyen T, Sharma D, Shi H, Lin Y, Liu B, Haldar S, Jackson S, Quertermous T. Molecular mechanisms of coronary artery disease risk at the locus. bioRxiv. 2023 Jan 27:10.1101/2023.01.26.525789. doi: 10.1101/2023.01.26.525789. PMID: 36747745; PMCID: PMC9900883.
  • Kim HJ, Cheng P, Travisano S, Weldy C, Monteiro JP, Kundu R, Nguyen T, Sharma D, Shi H, Lin Y, Liu B, Haldar S, Jackson S, Quertermous T. Molecular mechanisms of coronary artery disease risk at the PDGFD locus. Nat Commun. 2023 Feb 15;14(1):847. doi: 10.1038/s41467-023-36518-9. PMID: 36792607; PMCID: PMC9932166.
  • Shi H, Nguyen T, Zhao Q, Cheng P, Sharma D, Kim HJ, Brian Kim J, Wirka R, Weldy CS, Monteiro JP, Quertermous T. Discovery of Transacting Long Noncoding RNAs That Regulate Smooth Muscle Cell Phenotype. Circ Res. 2023 Mar 31;132(7):795-811. doi: 10.1161/CIRCRESAHA.122.321960. Epub 2023 Feb 28. PMID: 36852690; PMCID: PMC11056793.
  • Navarre BM, Clouthier KL, Ji X, Taylor A, Weldy CS, Dubin AM, Reddy S. miR Profile of Chronic Right Ventricular Pacing: a Pilot Study in Children with Congenital Complete Atrioventricular Block. J Cardiovasc Transl Res. 2023 Apr;16(2):287-299. doi: 10.1007/s12265-022-10318-w. Epub 2022 Sep 19. PMID: 36121621; PMCID: PMC10151311.
  • Weldy CS, Perez MV. From founder to function: Can we unravel phenotype from genotype? Heart Rhythm. 2023 Nov;20(11):1522-1524. doi: 10.1016/j.hrthm.2023.08.030. Epub 2023 Aug 24. PMID: 37625473.
  • Wang Q, Tang TM, Youlton N, Weldy CS, Kenney AM, Ronen O, Hughes JW, Chin ET, Sutton SC, Agarwal A, Li X, Behr M, Kumbier K, Moravec CS, Tang WHW, Margulies KB, Cappola TP, Butte AJ, Arnaout R, Brown JB, Priest JR, Parikh VN, Yu B, Ashley EA. Epistasis regulates genetic control of cardiac hypertrophy. medRxiv. 2023 Nov 8:10.1101/2023.11.06.23297858. doi: 10.1101/2023.11.06.23297858. PMID: 37987017; PMCID: PMC10659487.
  • Wang Q, Tang TM, Youlton N, Weldy CS, Kenney AM, Ronen O, Hughes JW, Chin ET, Sutton SC, Agarwal A, Li X, Behr M, Kumbier K, Moravec CS, Tang WHW, Margulies KB, Cappola TP, Butte AJ, Arnaout R, Brown JB, Priest JR, Parikh VN, Yu B, Ashley EA. Epistasis regulates genetic control of cardiac hypertrophy. Res Sq. 2023 Nov 20:10.21203/rs.3.rs-3509208/v1. doi: 10.21203/rs.3.rs-3509208/v1. PMID: 38045390; PMCID: PMC10690313.
  • Quertermous T, Li DY, Weldy CS, Ramste M, Sharma D, Monteiro JP, Gu W, Worssam MD, Palmisano BT, Park CY, Cheng P. Genome-Wide Genetic Associations Prioritize Evaluation of Causal Mechanisms of Atherosclerotic Disease Risk. Arterioscler Thromb Vasc Biol. 2024 Feb;44(2):323-327. doi: 10.1161/ATVBAHA.123.319480. Epub 2024 Jan 24. PMID: 38266112; PMCID: PMC10857784.
  • Jones JB, Liu L, Rank LA, Wetzel D, Woods EC, Biok N, Anderson SE, Lee MR, Liu R, Huth S, Sandhu BK, Gellman SH, McBride SM. Cationic Homopolymers Inhibit Spore and Vegetative Cell Growth of . ACS Infect Dis. 2021 May 14;7(5):1236-1247. doi: 10.1021/acsinfecdis.0c00843. Epub 2021 Mar 19. PMID: 33739823; PMCID: PMC8130196.
  • Woods EC, Nakasone TSM, Renault CA. Clinical reasoning for performance of transesophageal echocardiography in veterans with bacteremia. Antimicrob Steward Healthc Epidemiol. 2023 Dec 4;3(1):e221. doi: 10.1017/ash.2023.493. PMID: 38156239; PMCID: PMC10753505.
  • Jo J, Upadhyay T, Woods EC, Park KW, Pedowitz NJ, Jaworek-Korjakowska J, Wang S, Valdez TA, Fellner M, Bogyo M. Development of Oxadiazolone Activity-Based Probes Targeting FphE for Specific Detection of Infections. bioRxiv. 2023 Dec 12:10.1101/2023.12.11.571116. doi: 10.1101/2023.12.11.571116. PMID: 38168396; PMCID: PMC10760020.
  • Jo J, Upadhyay T, Woods EC, Park KW, Pedowitz NJ, Jaworek-Korjakowska J, Wang S, Valdez TA, Fellner M, Bogyo M. Development of Oxadiazolone Activity-Based Probes Targeting FphE for Specific Detection of Infections. J Am Chem Soc. 2024 Mar 13;146(10):6880-6892. doi: 10.1021/jacs.3c13974. Epub 2024 Feb 27. PMID: 38411555.